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2015
2 Scopus citations
Open Access
5 Scopus citations
2014

A central support system can facilitate implementation and sustainability of a classroom-based undergraduate research experience (CURE) in genomics

Lopatto, D., Hauser, C., Jones, C. J., Paetkau, D., Chandrasekaran, V., Dunbar, D., MacKinnon, C., Stamm, J., Alvarez, C., Barnard, D., Bedard, J. E. J., Bednarski, A. E., Bhalla, S., Braverman, J. M., Burg, M., Chung, H. M., DeJong, R. J., DiAngelo, J. R., Du, C., Eckdahl, T. T. & 53 others, Emerson, J., Frary, A., Frohlich, D., Goodman, A. L., Gosser, Y., Govind, S., Haberman, A., Hark, A. T., Hoogewerf, A., Johnson, D., Kadlec, L., Kaehler, M., Key, S. C. S., Kokan, N. P., Kopp, O. R., Kuleck, G. A., Lopilato, J., Martinez-Cruzado, J. C., McNeil, G., Mel, S., Nagengast, A., Overvoorde, P. J., Parrish, S., Preuss, M. L., Reed, L. D., Regisford, E. G., Revie, D., Robic, S., Roecklien-Canfield, J. A., Rosenwald, A. G., Rubin, M. R., Saville, K., Schroeder, S., Sharif, K. A., Shaw, M., Skuse, G., Smith, C. D., Smith, M., Smith, S. T., Spana, E. P., Spratt, M., Sreenivasan, A., Thompson, J. S., Wawersik, M., Wolyniak, M. J., Youngblom, J., Zhou, L., Buhler, J., Mardis, E., Leung, W., Shaffer, C. D., Threlfall, J. & Elgin, S. C. R., 21 Dec 2014, In : CBE Life Sciences Education. 13, 4, p. 711-723 13 p.

Research output: Contribution to journalArticle

27 Scopus citations

A course-based research experience: How benefits change with increased investment in instructional time

Shaffer, C. D., Alvarez, C. J., Bednarski, A. E., Dunbar, D., Goodman, A. L., Reinke, C., Rosenwald, A. G., Wolyniak, M. J., Bailey, C., Barnard, D., Bazinet, C., Beach, D. L., Bedard, J. E. J., Bhalla, S., Braverman, J., Burg, M., Chandrasekaran, V., Chung, H. M., Clase, K., DeJong, R. J. & 64 others, DiAngelo, J. R., Du, C., Eckdahl, T. T., Eisler, H., Emerson, J. A., Frary, A., Frohlich, D., Gosser, Y., Govind, S., Haberman, A., Hark, A. T., Hauser, C., Hoogewerf, A., Hoopes, L. L. M., Howell, C. E., Johnson, D., Jones, C. J., Kadlec, L., Kaehler, M., Catherine Silver Key, S., Kleinschmit, A., Kokan, N. P., Kopp, O., Kuleck, G., Leatherman, J., Lopilato, J., MacKinnon, C., Martinez-Cruzado, J. C., McNeil, G., Mel, S., Mistry, H., Nagengast, A., Overvoorde, P., Paetkau, D. W., Parrish, S., Peterson, C. N., Preuss, M., Reed, L. K., Revie, D., Robic, S., Roecklein-Canfield, J., Rubin, M. R., Saville, K., Schroeder, S., Sharif, K., Shaw, M., Skuse, G., Smith, C. D., Smith, M. A., Smith, S. T., Spana, E., Spratt, M., Sreenivasan, A., Stamm, J., Szauter, P., Thompson, J. S., Wawersik, M., Youngblom, J., Zhou, L., Mardis, E. R., Buhler, J., Leung, W., Lopatto, D. & Elgin, S. C. R., 3 Mar 2014, In : CBE Life Sciences Education. 13, 1, p. 111-130 20 p.

Research output: Contribution to journalArticle

62 Scopus citations

Analysis of the population structure of Anaplasma phagocytophilum using multilocus sequence typing

Huhn, C., Winter, C., Wolfsperger, T., Wüppenhorst, N., Strašek Smrdel, K., Skuballa, J., Pfäffle, M., Petney, T., Silaghi, C., Dyachenko, V., Pantchev, N., Straubinger, R. K., Schaarschmidt-Kiener, D., Ganter, M., Aardema, M. L. & Von Loewenich, F. D., 3 Apr 2014, In : PLoS ONE. 9, 4, e93725.

Research output: Contribution to journalArticle

Open Access
48 Scopus citations

A phylogenetic examination of the primary anthocyanin production pathway of the Plantae

Campanella, J. J., Smalley, J. V. & Dempsey, M. E., 25 Jan 2014, In : Botanical Studies. 55, 1

Research output: Contribution to journalArticle

22 Scopus citations

Comparative genomics reveals insights into avian genome evolution and adaptation

Avian Genome Consortium, 12 Dec 2014, In : Science. 346, 6215, p. 1311-1320 10 p.

Research output: Contribution to journalArticle

426 Scopus citations

Differential assessment of designations of wetland status using two delineation methods

Wu, M., Kalma, D. & Treadwell-Steitz, C., 1 Jan 2014, In : Environmental Management. 54, 1, p. 23-29 7 p.

Research output: Contribution to journalArticle

8 Scopus citations

Disease as a control of sea urchin populations in Nova Scotian kelp beds

Feehan, C. J. & Scheibling, R. E., 17 Mar 2014, In : Marine Ecology Progress Series. 500, p. 149-158 10 p.

Research output: Contribution to journalArticle

8 Scopus citations
4 Scopus citations

Evidence for a single loss of mineralized teeth in the common avian ancestor

Meredith, R. W., Zhang, G., Gilbert, M. T. P., Jarvis, E. D. & Springer, M. S., 12 Dec 2014, In : Science. 346, 6215, 1254390.

Research output: Contribution to journalArticle

46 Scopus citations

Forest response and recovery following disturbance in upland forests of the Atlantic Coastal Plain

Schäfer, K. V. R., Renninger, H. J., Carlo, N. J. & Vanderklein, D. W., 26 Jun 2014, In : Frontiers in Plant Science. 5, JUN, 294.

Research output: Contribution to journalArticle

4 Scopus citations

Harbouring the enemy: Kelp holdfasts protect juvenile sea urchins from predatory crabs

Feehan, C. J., Francis, F. T. Y. & Scheibling, R. E., 1 Jan 2014, In : Marine Ecology Progress Series. 514, p. 149-161 13 p.

Research output: Contribution to journalArticle

2 Scopus citations

HelitronScanner uncovers a large overlooked cache of Helitron transposons in many plant genomes

Xiong, W., He, L., Lai, J., Dooner, H. K. & Du, C., 15 Jul 2014, In : Proceedings of the National Academy of Sciences of the United States of America. 111, 28, p. 10263-10268 6 p.

Research output: Contribution to journalArticle

52 Scopus citations

Mangrove loss leads to fish hyperutilization of seagrass beds in a UNESCO biosphere reserve

Bologna, P. A. X., May 2014, In : Journal of Fish Biology. 84, 5, p. 1620-1625 6 p.

Research output: Contribution to journalArticle

2 Scopus citations

Model-to-data comparisons reveal influence of jellyfish interactions on plankton community dynamics

Crum, K. P., Fuchs, H. L., Bologna, P. A. X. & Gaynor, J. J., 15 Dec 2014, In : Marine Ecology Progress Series. 517, p. 105-119 15 p.

Research output: Contribution to journalArticle

5 Scopus citations

Molecular phylogeny and snp variation of polar bears (ursus maritimus), brown bears (u. arctos), and black bears (u. americanus) derived from genome sequences

Cronin, M. A., Rincon, G., Meredith, R. W., Macneil, M. D., Islas-Trejo, A., Cánovas, A. & Medrano, J. F., 1 Jan 2014, In : Journal of Heredity. 105, 3, p. 312-323 12 p.

Research output: Contribution to journalArticle

14 Scopus citations

Plant–soil feedbacks of exotic plant species across life forms: A meta-analysis

Meisner, A., Gera Hol, W. H., de Boer, W., Krumins, J. A., Wardle, D. A. & van der Putten, W. H., 1 Jan 2014, In : Biological Invasions. 16, 12, p. 2551-2561 11 p.

Research output: Contribution to journalArticle

37 Scopus citations

The evolution of the placenta drives a shift in sexual selection in livebearing fish

Pollux, B. J. A., Meredith, R. W., Springer, M. S., Garland, T. & Reznick, D. N., 11 Sep 2014, In : Nature. 513, 7517, p. 233-236 4 p.

Research output: Contribution to journalArticle

84 Scopus citations

The evolution of the sexually selected sword in xiphophorus does not compromise aerobic locomotor performance

Oufiero, C. E., Meredith, R. W., Jugo, K. N., Tran, P., Chappell, M. A., Springer, M. S., Reznick, D. N. & Garland, T., 1 Jan 2014, In : Evolution. 68, 6, p. 1806-1823 18 p.

Research output: Contribution to journalArticle

11 Scopus citations

The impact of Japanese knotweed on stream baseflow

Vanderklein, D. W., Galster, J. & Scherr, R., Apr 2014, In : Ecohydrology. 7, 2, p. 881-886 6 p.

Research output: Contribution to journalArticle

5 Scopus citations

To thine own self be false: Self-deceptive enhancement and sexual awareness influences on mating success

Lynn, C. D., Nathan Pipitone, R. & Keenan, J. P., 1 Apr 2014, In : Evolutionary Behavioral Sciences. 8, 2, p. 109-122 14 p.

Research output: Contribution to journalArticle

7 Scopus citations

Vanadium uptake and translocation in dominant plant species on an urban coastal brownfield site

Qian, Y., Gallagher, F. J., Feng, H., Wu, M. & Zhu, Q., 1 Apr 2014, In : Science of the Total Environment. 476-477, p. 696-704 9 p.

Research output: Contribution to journalArticle

38 Scopus citations
2013

A comparative study of wetland vegetation in the ausable and boquet river watersheds

Wu, M. & Kalma, D., 1 Jun 2013, In : Northeastern Naturalist. 20, 2, p. 229-254 26 p.

Research output: Contribution to journalArticle

3 Scopus citations

Allometry and photosynthetic capacity of poplar (Populus deltoides) along a metal contamination gradient in an urban brownfield

Renninger, H. J., Wadhwa, S., Gallagher, F. J., Vanderklein, D. & Schäfer, K. V. R., 1 Jan 2013, In : Urban Ecosystems. 16, 2, p. 247-263 17 p.

Research output: Contribution to journalArticle

9 Scopus citations

An analysis of the population genetics of restored Zostera marina plantings in Barnegat Bay, New Jersey

Campanella, J. J., Bologna, P. A. X., Smalley, J. V., Avila, D. N., Lee, K. N., Areche, E. C. & Slavin, L. J., 1 Jan 2013, In : Population Ecology. 55, 1, p. 121-133 13 p.

Research output: Contribution to journalArticle

10 Scopus citations

A phylogenetic blueprint for a modern whale

Gatesy, J., Geisler, J. H., Chang, J., Buell, C., Berta, A., Meredith, R. W., Springer, M. S. & McGowen, M. R., 1 Feb 2013, In : Molecular Phylogenetics and Evolution. 66, 2, p. 479-506 28 p.

Research output: Contribution to journalArticle

118 Scopus citations

A Ranavirus-related mortality event and the first report of ranavirus in New Jersey

Monsen-Collar, K., Hazard, L. & Dolcemascolo, P., 1 Dec 2013, In : Herpetological Review. 44, 2, p. 263-265 3 p.

Research output: Contribution to journalArticle

Effect of black tea extract on herpes simplex virus-1 infection of cultured cells

Cantatore, A., Randall, S. D., Traum, D. & Adams, S. D., 18 Jun 2013, In : BMC Complementary and Alternative Medicine. 13, 139.

Research output: Contribution to journalArticle

21 Scopus citations

Evolution of Sindbis Virus with a Low-Methionine-Resistant Phenotype Is Dependent Both on a Pre-Existing Mutation and on the Methionine Concentration in the Medium

Stollar, V., Mensah, V., Adams, S. & Li, M. L., 27 Mar 2013, In : PLoS ONE. 8, 3, e60504.

Research output: Contribution to journalArticle

3 Scopus citations

Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.)

Ming, R., VanBuren, R., Liu, Y., Yang, M., Han, Y., Li, L. T., Zhang, Q., Kim, M. J., Schatz, M. C., Campbell, M., Li, J., Bowers, J. E., Tang, H., Lyons, E., Ferguson, A. A., Narzisi, G., Nelson, D. R., Blaby-Haas, C. E., Gschwend, A. R., Jiao, Y. & 51 others, Der, J. P., Zeng, F., Han, J., Min, X. J., Hudson, K. A., Singh, R., Grennan, A. K., Karpowicz, S. J., Watling, J. R., Ito, K., Robinson, S. A., Hudson, M. E., Yu, Q., Mockler, T. C., Carroll, A., Zheng, Y., Sunkar, R., Jia, R., Chen, N., Arro, J., Wai, C. M., Wafula, E., Spence, A., Han, Y., Xu, L., Zhang, J., Peery, R., Haus, M. J., Xiong, W., Walsh, J. A., Wu, J., Wang, M. L., Zhu, Y. J., Paull, R. E., Britt, A. B., Du, C., Downie, S. R., Schuler, M. A., Michael, T. P., Long, S. P., Ort, D. R., William Schopf, J., Gang, D. R., Jiang, N., Yandell, M., dePamphilis, C. W., Merchant, S. S., Paterson, A. H., Buchanan, B. B., Li, S. & Shen-Miller, J., 10 May 2013, In : Genome Biology. 14, 5, R41.

Research output: Contribution to journalArticle

166 Scopus citations

Inhibition of herpes simplex virus type 1 with the modified green tea polyphenol palmitoyl-epigallocatechin gallate

De Oliveira, A., Adams, S. D., Lee, L. H., Murray, S. R., Hsu, S. D., Hammond, J. R., Dickinson, D., Chen, P. & Chu, T. C., 1 Feb 2013, In : Food and Chemical Toxicology. 52, p. 207-215 9 p.

Research output: Contribution to journalArticle

35 Scopus citations

InsertionMapper: A pipeline tool for the identification of targeted sequences from multidimensional high throughput sequencing data

Xiong, W., He, L., Li, Y., Dooner, H. K. & Du, C., 4 Oct 2013, In : BMC Genomics. 14, 1, 679.

Research output: Contribution to journalArticle

3 Scopus citations

Lead accumulation and association with Fe on Typha latifolia root from an urban brownfield site

Feng, H., Qian, Y., Gallagher, F. J., Wu, M., Zhang, W., Yu, L., Zhu, Q., Zhang, K., Liu, C. J. & Tappero, R., 1 Jun 2013, In : Environmental Science and Pollution Research. 20, 6, p. 3743-3750 8 p.

Research output: Contribution to journalArticle

23 Scopus citations

Molecular decay of enamel matrix protein genes in turtles and other edentulous amniotes.

Meredith, R. W., Gatesy, J. & Springer, M. S., 2013, In : Unknown Journal. 13, 1 p.

Research output: Contribution to journalArticle

28 Scopus citations
8 Scopus citations

Ras-induced melanoma transformation is associated with the proteasomal degradation of the transcriptional repressor ICER

Healey, M., Crow, M. S. & Molina, C. A., 1 Sep 2013, In : Molecular Carcinogenesis. 52, 9, p. 692-704 13 p.

Research output: Contribution to journalArticle

5 Scopus citations

Rod Monochromacy and the Coevolution of Cetacean Retinal Opsins

Meredith, R. W., Gatesy, J., Emerling, C. A., York, V. M. & Springer, M. S., 1 Apr 2013, In : PLoS Genetics. 9, 4, e1003432.

Research output: Contribution to journalArticle

73 Scopus citations

Skeletal muscle triacylglycerol hydrolysis does not influence metabolic complications of obesity

Sitnick, M. T., Basantani, M. K., Cai, L., Schoiswohl, G., Yazbeck, C. F., Distefano, G., Ritov, V., DeLany, J. P., Schreiber, R., Stolz, D. B., Gardner, N. P., Kienesberger, P. C., Pulinilkunnil, T., Zechner, R., Goodpaster, B. H., Coen, P. & Kershaw, E. E., 1 Oct 2013, In : Diabetes. 62, 10, p. 3350-3361 12 p.

Research output: Contribution to journalArticle

Open Access
36 Scopus citations

Soil and freshwater and marine sediment food webs: Their structure and function

Krumins, J. A., Van Oevelen, D., Martijn Bezemer, T., De Deyn, G. B., Gera Hol, W. H., Van Donk, E., De Boer, W., De Ruiter, P. C., Middelburg, J. J., Monroy, F., Soetaert, K., Thébault, E., Van De Koppel, J., Van Veen, J. A., Viketoft, M. & Van Der Putten, W. H., 1 Jan 2013, In : BioScience. 63, 1, p. 35-42 8 p.

Research output: Contribution to journalArticle

20 Scopus citations

The spectral properties of (-)-epigallocatechin 3-O-gallate (EGCG) fluorescence in different solvents: Dependence on solvent polarity

Snitsarev, V., Young, M. N., Miller, R. M. S. & Rotella, D. P., 22 Nov 2013, In : PLoS ONE. 8, 11, e79834.

Research output: Contribution to journalArticle

15 Scopus citations

Transient photocurrent in molecular junctions: Singlet switching on and triplet blocking

Petrov, E. G., Leonov, V. O. & Snitsarev, V., 14 May 2013, In : Journal of Chemical Physics. 138, 18, 184709.

Research output: Contribution to journalArticle

9 Scopus citations

Triptolide induces lysosomal-mediated programmed cell death in MCF-7 breast cancer cells

Owa, C., Messina, M. E. & Halaby, R., 4 Sep 2013, In : International Journal of Women's Health. 5, 1, p. 557-569 13 p.

Research output: Contribution to journalArticle

24 Scopus citations

Validating the identity of Paramoeba invadens, the causative agent of recurrent mass mortality of sea urchins in Nova Scotia, Canada

Feehan, C. J., Johnson-Mackinnon, J., Scheibling, R. E., Lauzon-Guay, J. S. & Simpson, A. G. B., 11 Apr 2013, In : Diseases of Aquatic Organisms. 103, 3, p. 209-227 19 p.

Research output: Contribution to journalArticle

48 Scopus citations
2012

Acid sensing ion channels regulate neuronal excitability by inhibiting BK potassium channels

Petroff, E., Snitsarev, V., Gong, H. & Abboud, F. M., 5 Oct 2012, In : Biochemical and Biophysical Research Communications. 426, 4, p. 511-515 5 p.

Research output: Contribution to journalArticle

9 Scopus citations

Adaption of Synechococcus sp. IU 625 to growth in the presence of mercuric chloride

Chu, T. C., Murray, S. R., Todd, J., Perez, W., Yarborough, J. R., Okafor, C. & Lee, L. H., 1 Jan 2012, In : Acta Histochemica. 114, 1, p. 6-11 6 p.

Research output: Contribution to journalArticle

5 Scopus citations

A geochemical study of toxic metal translocation in an urban brownfield wetland

Qian, Y., Gallagher, F. J., Feng, H. & Wu, M., 1 Jul 2012, In : Environmental Pollution. 166, p. 23-30 8 p.

Research output: Contribution to journalArticle

39 Scopus citations

Aggregative feeding behavior in sea urchins leads to destructive grazing in a Nova Scotian kelp bed

Feehan, C., Scheibling, R. E. & Lauzon-Guay, J. S., 10 Jan 2012, In : Marine Ecology Progress Series. 444, p. 69-83 15 p.

Research output: Contribution to journalArticle

Open Access
19 Scopus citations

An outbreak of sea urchin disease associated with a recent hurricane: Support for the "killer storm hypothesis" on a local scale

Feehan, C., Scheibling, R. E. & Lauzon-Guay, J. S., 10 Feb 2012, In : Journal of Experimental Marine Biology and Ecology. 413, p. 159-168 10 p.

Research output: Contribution to journalArticle

22 Scopus citations

Coxsackievirus and adenovirus receptor (CAR) mediates trafficking of acid sensing ion channel 3 (ASIC3) via PSD-95

Excoffon, K. J. D. A., Kolawole, A. O., Kusama, N., Gansemer, N. D., Sharma, P., Hruska-Hageman, A. M., Petroff, E. & Benson, C. J., 17 Aug 2012, In : Biochemical and Biophysical Research Communications. 425, 1, p. 13-18 6 p.

Research output: Contribution to journalArticle

6 Scopus citations