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Dr. Jinshan Gao's research interests lie in 1) the development of free radical reagents for glycan and protein structure elucidation, 2) the identification and discovery of potential serum biomarkers for cancers, and 3) study of the molecular mechanism of these diseases by combining biomimetic reagents and high-throughput mass spectrometry. His research team recently developed methylated free radical activated glycan sequencing reagent (Me-FRAGS) which significantly simplify the systematic analysis of complex glycan structures using mass spectrometry.
This approach provides valuable information for glycan structure analysis and offers unique advantages compared to earlier studies. In order to apply this approach to the identification of potential glycan biomarkers for cancers, resin-supported and magnetic nanoparticle-based free radical reagent are being designed and synthesized.
Bioinformatics tools for the analysis of DNA (RNA) and protein sequences have been well developed. However, these tools cannot be directly applied to glycan bioinformatics due to the fact that glycan can exhibit complicated branch structures. As with proteomics, mass spectrometry (MS) has been broadly utilized for the characterization of glycans. Unfortunately, no efficient software tools were available to interpret the spectra due to the complexity of glycan structure. Recently, his group has developed free radical reagents for glycan structure characterization. These free radical reagents exhibit high fragmentation efficiency and systematic fragmentation. However, the interpretation of spectra has to be done manually. In order to overcome this barrier, they developed a glycan fragmentation assignment software denominated as “Glyc”.
Research interests
Interests lie in 1) the development of free radical reagents for glycan and protein structure elucidation, 2) the identification and discovery of potential serum biomarkers for cancers, and 3) study of the molecular mechanism of these diseases by combining biomimetic reagents and high-throughput mass spectrometry.
Scholarly Interests
Faculty/Media Expert
Expert on mass spectrometry, glycomics, proteomics, and gas-phase free radical.
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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Collaborations and top research areas from the last five years
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MRI: Track 1: Acquisition of a Gas Chromatography-Mass Spectrometer for Advancing Research and Education at Montclair State University
Wu, M. S. (CoPI), Goodey, N. (CoPI), Gao, J. (CoPI), Catalano, J. (PI) & Hirscher, N. (CoPI)
1/09/23 → 31/08/26
Project: Research
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MRI: Acquisition of a High-Resolution Accurate-Mass Orbitrap LC-MS System at Montclair State University
Gao, J. (PI), Wu, M. S. (CoPI), Goodey, N. (CoPI), Deng, Y. (CoPI) & Rotella, D. (CoPI)
1/08/21 → 31/07/24
Project: Research
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RUI: Development of Fluorescent Free-Radical Tags for N-Glycan Quantitation and Characterization using UPLC-MS/MS
Gao, J. (PI)
1/06/21 → 31/05/24
Project: Research
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RUI: GLYCAN CHARACTERIZATION AND QUANTITATIVE ANALYSIS VIA FREE-RADICAL INDUCED DISSOCIATION
Gao, J. (PI)
National Science Foundation (NSF)
1/06/17 → 31/05/20
Project: Research
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Development of mass spectrometric glycan characterization tags using acid-base chemistry and/or free radical chemistry
Murtada, R., Finn, S. & Gao, J., 1 Mar 2024, In: Mass Spectrometry Reviews. 43, 2, p. 269-288 20 p.Research output: Contribution to journal › Review article › peer-review
1 Scopus citations -
Gas-Phase Ion/Ion Reactions to Enable Radical-Directed Dissociation of Fatty Acid Ions: Application to Localization of Methyl Branching
Shenault, D. M., Fabijanczuk, K. C., Murtada, R., Finn, S., Gonzalez, L. E., Gao, J. & McLuckey, S. A., 27 Feb 2024, In: Analytical Chemistry. 96, 8, p. 3389-3401 13 p.Research output: Contribution to journal › Article › peer-review
1 Scopus citations -
Mechanistic Study into Free Radical-Activated Glycan Dissociations through Isotope-Labeled Cellobioses
Fabijanczuk, K., Yu, Z. J., Bakestani, R. M., Murtada, R., Denton, N., Gaspar, K., Otegui, T., Acosta, J., Kenttämaa, H. I., Eshuis, H. & Gao, J., 7 Feb 2023, In: Analytical Chemistry. 95, 5, p. 2932-2941 10 p.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Rapid Characterization of Antibodies via Automated Flow Injection Coupled with Online Microdroplet Reactions and Native-pH Mass Spectrometry
Gunawardena, H. P., Ai, Y., Gao, J., Zare, R. N. & Chen, H., 14 Feb 2023, In: Analytical Chemistry. 95, 6, p. 3340-3348 9 p.Research output: Contribution to journal › Article › peer-review
Open Access6 Scopus citations -
Free Radical-Based Sequencing for Native Top-Down Mass Spectrometry
Rojas Ramírez, C., Murtada, R., Gao, J. & Ruotolo, B. T., 7 Dec 2022, In: Journal of the American Society for Mass Spectrometry. 33, 12, p. 2283-2290 8 p.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations