Katherine Herbert

Research output

Research output per year 2001 2004 2006 2007 2015 2023

• 25 Conference contribution
• 4 Article
• 2 Conference article
• 1 Book
• 1 More
  • 1 Chapter

Research output per year

Research output per year

Search results

• 2023

  Professional and Capacity Building in K-12 Computer Science Education: A Multi-Faceted Approach

  Herbert, K., Anu, V. K., Sultana, K. Z., Robila, S., Ryan Miller, J., Hagiwara, S., Goldstein, R. & Marlowe, T., 6 Mar 2023, SIGCSE 2023 - Proceedings of the 54th ACM Technical Symposium on Computer Science Education. Association for Computing Machinery, Inc, p. 1384 1 p. (SIGCSE 2023 - Proceedings of the 54th ACM Technical Symposium on Computer Science Education; vol. 2).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  Open Access

  • Computer science 100%
  • computer science 87%
  • Education 84%
  • Curricula 46%
  • education 30%

• Teachers' Perception and Experiences of Computer Science Education in K-8 Schools

  Anu, V., Hagiwara, S., Herbert, K., Sultana, K. Z., Shin, M., Goldstein, R. & Virella, P., 2023, 2023 Intermountain Engineering, Technology and Computing, IETC 2023. Institute of Electrical and Electronics Engineers Inc., p. 226-231 6 p. (2023 Intermountain Engineering, Technology and Computing, IETC 2023).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • instructors 100%
  • Computer science 76%
  • education 74%
  • computer science 66%
  • Education 64%
• 2022

  Creating an Appropriate Computer Science and Computational Thinking Graduate Curriculum for K-12 Teachers: Context and Initial Results

  Herbert-Berger, K. G., Hagiwara, S., Rogacki, E. M. & Marlowe, T. J., 2022, 2022 IEEE Integrated STEM Education Conference, ISEC 2022. Institute of Electrical and Electronics Engineers Inc., p. 361-363 3 p. (2022 IEEE Integrated STEM Education Conference, ISEC 2022).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Curriculum 100%
  • Curricula 79%
  • Computer science 76%
  • Computer Science 72%
  • computer science 66%
  1 Scopus citations
• 2021

  Interdisciplinary STEM Undergraduate Programs and the Effectiveness of Computing Competencies within the Curriculum

  Herbert, K. G., Marlowe, T. J., Leune, K., Siegfried, R. M. & Wilmanski, J., 2021, 2021 11th IEEE Integrated STEM Education Conference, ISEC 2021. Institute of Electrical and Electronics Engineers Inc., p. 280-283 4 p. (2021 11th IEEE Integrated STEM Education Conference, ISEC 2021).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Data Science 100%
  • Bioinformatics 81%
  • Curricula 77%
  • Security of data 69%
  • Data acquisition 63%

• Trends of commonly used programming languages in CS1 and CS2 learning

  Siegfried, R. M., Herbert-Berger, K. G., Leune, K. & Siegfried, J. P., 17 Aug 2021, ICCSE 2021 - IEEE 16th International Conference on Computer Science and Education. Institute of Electrical and Electronics Engineers Inc., p. 407-412 6 p. (ICCSE 2021 - IEEE 16th International Conference on Computer Science and Education).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • programming language 100%
  • Computer programming languages 83%
  • Computer programming 64%
  • Education computing 51%
  • Students 45%
  4 Scopus citations
• 2020

  Cs2 and the impact of programming language choice

  Siegfried, R. M., Herbert-Berger, K. G. & Siegfried, J. P., 26 Feb 2020, SIGCSE 2020 - Proceedings of the 51st ACM Technical Symposium on Computer Science Education. Association for Computing Machinery, p. 1353 1 p. (Annual Conference on Innovation and Technology in Computer Science Education, ITiCSE).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Programming Languages 100%
  • programming language 95%
  • Computer programming languages 79%
  • Language 71%
  • Students 64%
• 2015

  A mobile tool for collecting scientific experimental data

  Melendez, A., Sanders, W., Smullyan, B., Uddin, A. & Herbert, K. G., 8 Jun 2015, ISEC 2015 - 5th IEEE Integrated STEM Education Conference. Institute of Electrical and Electronics Engineers Inc., p. 135-137 3 p. 7119906. (ISEC 2015 - 5th IEEE Integrated STEM Education Conference).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • university teacher 100%
  • small group 61%
  • sustainability 51%
  • student 51%
  • Group 21%

• Current developments in big data and sustainability sciences in mobile citizen science applications

  Panchariya, N. S., Destefano, A. J., Nimbagal, V., Ragupathy, R., Yavuz, S., Herbert, K. G., Hill, E. & Fails, J. A., 10 Aug 2015, Proceedings - 2015 IEEE 1st International Conference on Big Data Computing Service and Applications, BigDataService 2015. Institute of Electrical and Electronics Engineers Inc., p. 202-212 11 p. 7184882. (Proceedings - 2015 IEEE 1st International Conference on Big Data Computing Service and Applications, BigDataService 2015).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Data Science 100%
  • Conservation 71%
  • Big data 66%
  • Sustainable development 65%
  8 Scopus citations

• Geotagger: A collaborative environmental inquiry platform

  Fails, J. A., Herbert, K., Hill, E., De Stefano, A., Hesse, B., Cushman, P., Gant, T., Shah, S., Abreu-Cruz, A., Panchariya, N. & Nimbagal, V., 19 Aug 2015, 2015 International Conference on Collaboration Technologies and Systems, CTS 2015. Smari, W. W., Natarian, J., McQuay, W. & Nygard, M. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 383-390 8 p. 7210453. (2015 International Conference on Collaboration Technologies and Systems, CTS 2015).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Feedback 100%
  2 Scopus citations
• 2014

  GeoTagger: A collaborative and participatory environmental inquiry system

  Fails, J. A., Herbert, K. G., Hill, E., Loeschorn, C., Kordecki, S., Dymko, D., DeStefano, A. & Christian, Z., 1 Jan 2014, CSCW 2014 - Companion Publication of the 17th ACM Conference on Computer Supported Cooperative Work and Social Computing. Association for Computing Machinery, p. 157-160 4 p. (Proceedings of the ACM Conference on Computer Supported Cooperative Work, CSCW).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
  14 Scopus citations

• Scientific data infrastructure for sustainability science mobile applications

  Herbert, K. G., Hill, E., Fails, J. A., Ajala, J. O., Boniface, R. T. & Cushman, P. W., 22 Sep 2014, Proceedings - 2014 IEEE International Congress on Big Data, BigData Congress 2014. Chen, P., Chen, P. & Jain, H. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 804-805 2 p. 6906874. (Proceedings - 2014 IEEE International Congress on Big Data, BigData Congress 2014).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Ecosystems 100%
  • Sustainable development 82%
  • Data integration 53%
  • Information management 43%
  • Education 39%
  3 Scopus citations
• 2013

  Mobile interaction and query optimization in a protein-ligand data analysis system

  Lapeine, M., Herbert, K. G., Hill, E. & Goodey, N. M., 29 Jul 2013, SIGMOD 2013 - International Conference on Management of Data. 1 p. (Proceedings of the ACM SIGMOD International Conference on Management of Data).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Ligands 100%
  • Proteins 68%
  • Drug Discovery 50%
  1 Scopus citations
• 2008

  Algorithms and software for calculating and visualizing the cardinality of the grand bounding ball by means of intersection trees

  Barton, R., Zhang, S. & Herbert, K. G., 1 Dec 2008, Proceedings of the 2008 International Conference on Data Mining, DMIN 2008. Stahlbock, R., Crone, S. F. & Lessmann, S. (eds.). p. 529-535 7 p.

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Phylogenetic Tree 100%
  • Software 95%
  • Cardinality 85%
  • Ball 85%
  • Intersection 79%

• Will there ever be consensus on CS1?

  Siegfried, R. M., Chays, D. & Herbert, K. G., 1 Dec 2008, Proceedings of the 2008 International Conference on Frontiers in Education: Computer Science and Computer Engineering, FECS 2008. p. 18-23 6 p. (Proceedings of the 2008 International Conference on Frontiers in Education: Computer Science and Computer Engineering, FECS 2008).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Teaching 100%
  • Students 71%
  • Robot programming 68%
  • Science Education 54%
  • Computer science 48%
  7 Scopus citations
• 2007

  An interdisciplinary undergraduate science informatics degree in a liberal arts context

  Deremer, D. & Herbert, K. G., 1 Dec 2007, Proceedings of the Thirty-Seventh SIGCSE Technical Symposium on Computer Science Education. p. 179-183 5 p. (Proceedings of the Thirty-Seventh SIGCSE Technical Symposium on Computer Science Education).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Informatics 100%
  • art 61%
  • Ethical aspects 36%
  • Bioinformatics 30%
  • Curricula 29%
  6 Scopus citations

• A study of phylogenetic tools for genomic nomenclature data cleaning

  Marra, J. D., Herbert, K. G. & Wang, J. T. L., 27 Aug 2007, ITiCSE 2007: 12th Annual Conference on Innovation and Technology in Computer Science Education - Inclusive Education in Computer Science. 1 p. (ITiCSE 2007: 12th Annual Conference on Innovation and Technology in Computer Science Education - Inclusive Education in Computer Science).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Terminology 100%
  • poster 96%
  • Cleaning 85%

• Prediction of modulators of pyruvate kinase in smiles text using aprori methods

  Caronna, J., Sharma, R., Marra, J., Iuorno, V. L., Herbert, K. G. & Toney, J. H., 27 Aug 2007, ITiCSE 2007: 12th Annual Conference on Innovation and Technology in Computer Science Education - Inclusive Education in Computer Science. 1 p. (ITiCSE 2007: 12th Annual Conference on Innovation and Technology in Computer Science Education - Inclusive Education in Computer Science).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Enzymes 100%
  • Modulators 88%
  • Molecules 84%
  • Glycolysis 73%
  • data bank 55%

• Toward an integrated RNA motif database

  Wang, J. T. L., Wen, D., Shapiro, B. A., Herbert, K. G., Li, J. & Ghosh, K., 3 Aug 2007, Data Integration in the Life Sciences - 4th International Workshop, DILS 2007, Proceedings. p. 27-36 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4544 LNBI).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Mining 100%
  • RNA 97%
  • Genes 76%
  • Gene Ontology 69%
  • Ontology 67%
  1 Scopus citations
• 2006

  A new kernel method for RNA classification

  Wu, X., Wang, J. T. L. & Herbert, K. G., 1 Dec 2006, Proceedings - Sixth IEEE Symposium on BioInformatics and BioEngineering, BIBE 2006. p. 201-208 8 p. 4019660. (Proceedings - Sixth IEEE Symposium on BioInformatics and BioEngineering, BIBE 2006).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Support Vector Machine 100%
  • RNA 98%
  • Support vector machines 65%
  • Machine Learning 30%
  • Untranslated RNA 30%
  2 Scopus citations

• Automated gene processing and exon sequence retrieval

  Fatima, T., Marra, J., Realubit, R., Schegolev, G. & Herbert, K. G., 2006, Working Group Reports on ITiCSE on Innovation and Technology in Computer Science Education 2006. p. 366 1 p. (Working Group Reports on ITiCSE on Innovation and Technology in Computer Science Education 2006).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

• Automated gene processing and exon sequence retrieval

  Fatima, T., Marra, J., Realubit, R., Schegolev, G. & Herbert, K. G., 29 Sep 2006, ITiCSE06 - Proceedings of the 11th Annual SIGCSE Conference on Innovation and Technology in Computer Science Education. 1 p. (ITiCSE06 - Proceedings of the 11th Annual SIGCSE Conference on Innovation and Technology in Computer Science Education; vol. 2006).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

• PhyloMiner: A tool for evolutionary data analysis

  Zhang, S., Herbert, K. G., Wang, J. T. L., Piel, W. H. & Stockwell, D. R. B., 1 Dec 2006, Proceedings - 18th International Conference on Scientific and Statistical Database Management, SSDBM 2006. p. 129-132 4 p. 1644306. (Proceedings of the International Conference on Scientific and Statistical Database Management, SSDBM).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Phylogenetic Tree 100%
  • Data analysis 72%
  • Pathogens 53%
  • Drug Discovery 53%
  • Frequent Pattern 34%
  1 Scopus citations
• 2004

  XML clustering by principal component analysis

  Liu, J., Wang, J. T. L., Hsu, W. & Herbert, K. G., 1 Dec 2004, Proceedings - 16th IEEE International Conference on Tools with Artificial Intelligence, ICTAI 2004. Khoshgoftaar, T. M. (ed.). p. 658-662 5 p.

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • XML 100%
  • Principal component analysis 97%
  • Electronic data interchange 27%
  • Information management 23%
  31 Scopus citations
• 2002

  A structure-based search engine for phylogenetic databases

  Shan, H., Herbert, K. G., Piel, W. H., Shasha, D. & Wang, J. T. L., 1 Jan 2002, Proceedings - 14th International Conference on Scientific and Statistical Database Management, SSDBM 2002. Kennedy, J. (ed.). IEEE Computer Society, Vol. 2002-January. p. 7-10 4 p. 1029699

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Search engines 100%
  • Phylogeny 70%
  15 Scopus citations
• 2001

  Approximate searching in phylogenetic databases

  Herbert, K. G., Shan, H. & Wang, J. T. L., 1 Dec 2001, Proceedings of the Atlantic Symposium on Computational Biology and Genome Information Systems and Technology, CBGIST 2001. Wu, C. H., Wang, P. P. & Wang, J. T. L. (eds.). p. 140-142 3 p. (Proceedings of the Atlantic Symposium on Computational Biology and Genome Information Systems and Technolgoy, CBGIST 2001).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Phylogeny 100%
  • Databases 42%
  • phylogeny 39%
  • methodology 18%
  • organisms 10%