Microwave imaging is based on the electrical property (permittivity and conductivity) differences in materials. Microwave imaging for biomedical applications is particularly interesting, mainly due to the fact that available range of dielectric properties for different tissues can provide important functional information about their health. Under the assumption that a 3D scattering problem can be reasonably represented as a simplified 2D model, one can take advantage of the simplicity and lower computational cost of 2D models to characterize such 3D phenomenon. Nonetheless, by eliminating excessive model simplifications, 3D microwave imaging provides potentially more valuable information over 2D techniques, and as a result, more accurate dielectric property maps may be obtained. In this paper, we present some advances we have made in three-dimensional image reconstruction, and show the results from a 3D breast phantom experiment using our clinical microwave imaging system at Dartmouth Hitchcock Medical Center (DHMC), NH.